Fitness data for PS417_15235 in Pseudomonas simiae WCS417

short-chain dehydrogenase
SEED: Short-chain dehydrogenase/reductase SDR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil soil sample 3; outgrowth in LB -1.3 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.5 compare
seeds Growth on radish seeds for 72 hours -1.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -0.9 compare
carbon source Gly-Glu (C) -1.0 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.1 compare
carbon source Gly-Glu (C) -1.0 -2.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -1.8 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.9 -1.9 compare
phage JP1 MOI 10 -0.8 -0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +1.6 compare
phage P. simiae ORA MOI 0.1 +0.8 +1.3 compare
seeds Growth on radish seeds for 72 hours +0.9 +1.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.9 +1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.0 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.8 compare
soil soil sample 5; outgrowth in LB +1.1 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.8 +1.6 compare