Fitness data for PS417_15215 in Pseudomonas simiae WCS417

protein activator of alkane oxidation PraA
SEED: protein activator of alkane oxidation PraA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
soil soil sample 6; outgrowth in LB -2.7 -1.9 compare
phage P. simiae OR1 MOI 0.1 -2.2 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -1.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.4 -1.4 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.4 -2.2 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.2 -2.5 compare
stress R2A with Fusaric 120 ug/mL -1.2 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.3 compare
phage P. simiae OR Antrim MOI 1 -1.1 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +2.3 compare
supernatant control Vogels_fungal_media 0.1X +1.3 +2.5 compare
phage P. simiae Grant Run MOI 0.1 +1.3 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.4 +1.7 compare