Fitness data for PS417_01500 in Pseudomonas simiae WCS417

amino acid transporter
SEED: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
KEGG: polar amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Thallium(I) acetate 0.0625 mg/ml -0.7 -2.7 compare
soil soil sample 4; outgrowth in LB -0.7 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.0 compare
phage P. simiae OR Antrim MOI 10 -0.6 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
liquid stress Fraxetin 2 mM; liquid stress -0.6 -3.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.5 compare
nophagecontrol Only library -0.6 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -2.1 compare
phage JP1 MOI 1 -0.5 -1.7 compare
carbon source Carbon source L-Citrulline 5 mM -0.5 -2.3 compare
carbon source Carbon source L-Citrulline 10 mM -0.5 -2.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -2.0 compare
phage JP1 MOI 10 -0.5 -1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -1.8 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.5 -1.8 compare
soil soil sample 5; outgrowth in LB -0.5 -1.3 compare
nitrogen source Glycine (N) -0.4 -2.4 compare
phage Wcs_1 +0.6 +2.6 compare