Fitness data for PS417_14910 in Pseudomonas simiae WCS417

C4-dicarboxylate ABC transporter
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component
KEGG: C4-dicarboxylate-binding protein DctP

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.8 compare
carbon source succinate (C) -0.6 -3.0 compare
phage P. simiae Grant Run MOI 10 -0.6 -1.8 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -1.5 compare
carbon source L-Malic (C) -0.5 -2.6 compare
carbon source D-Sorbitol (C) -0.5 -2.9 compare
lb LB_control -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.8 compare
phage P. simiae OR Antrim MOI 0.1 +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +1.5 compare
soil soil sample 5; outgrowth in LB +0.6 +1.8 compare
phage P. simiae OR Antrim MOI 10 +0.6 +2.1 compare
soil soil sample 2; outgrowth in LB +0.7 +3.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.4 compare