Fitness data for PS417_14710 in Pseudomonas simiae WCS417

isochorismatase
SEED: Amidases related to nicotinamidase
KEGG: isochorismatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.1 -1.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) -2.0 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -1.1 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.3 -1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -1.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.2 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.4 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.0 -1.5 compare
phage P. simiae Grant Run MOI 0.1 -1.0 -0.9 compare
nophagecontrol Only library -1.0 -0.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.2 compare
root root sample 6; outgrowth in LB -0.9 -0.8 compare
liquid stress Scopoletin 1 mM; liquid stress +0.9 +2.7 compare
carbon source L-Valine (C) +0.9 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.3 compare
stress methylglyoxal 0.032 vol% +1.0 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.2 compare
phage P. simiae Grant Run MOI 0.1 +1.1 +1.5 compare
phage P. simiae ORA MOI 1 +1.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.6 +3.7 compare