Fitness data for PS417_14680 in Pseudomonas simiae WCS417

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil soil sample 8; outgrowth in LB -0.9 -2.7 compare
stress Gentamicin 0.008 mg/ml -0.7 -2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -2.1 compare
stress L-Lysine 60 mM -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -1.8 compare
phage P. simiae Grant Run MOI 0.1 -0.6 -1.6 compare
carbon source Carbon source L-Citrulline 10 mM -0.6 -1.6 compare
phage JP1 MOI 1 +0.6 +1.4 compare
stress methylglyoxal 0.032 vol% +0.6 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.3 compare
soil soil sample 3; outgrowth in LB +0.7 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
nitrogen source Adenine (N) +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.2 compare
carbon source L-Valine (C) +0.9 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.6 compare