Fitness data for PS417_14655 in Pseudomonas simiae WCS417

lysine transporter LysE
SEED: Putative threonine efflux protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
root root sample 6; outgrowth in LB -3.9 -1.3 compare
phage P. simiae OR Antrim MOI 0.1 -2.8 -1.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.0 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -0.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.7 -1.2 compare
seeds Growth on radish seeds for 72 hours -1.7 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -1.1 compare
carbon source L-Leucine (C) -1.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -0.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.0 compare
phage JP1 MOI 10 -1.4 -0.6 compare
supernatant control Vogels_fungal_media 0.1X -1.3 -1.1 compare
solid stress 80% Methanol 0.5 mM; solid stress -1.3 -1.5 compare
liquid stress 80% Methanol 0.5 mM; liquid stress -1.3 -1.7 compare
soil soil sample 2; outgrowth in LB +1.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3 +1.2 compare
phage P. simiae ORA MOI 0.1 +1.4 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.3 +2.6 compare