Fitness data for PS417_01450 in Pseudomonas simiae WCS417

integrase
SEED: putative integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
solid stress 80% Methanol 0.5 mM; solid stress -0.5 -3.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.4 -1.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.4 -2.3 compare
phage JP1 MOI 10 -0.4 -1.8 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +2.0 compare
stress Choline chloride 300 mM +0.4 +2.5 compare
stress methylglyoxal 0.032 vol% +0.4 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.6 compare
motility outer cut, LB soft agar motility assay +0.4 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.1 compare
motility inner cut, LB soft agar motility assay +0.5 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.7 compare
seeds Growth on radish seeds for 72 hours +0.5 +2.7 compare
phage P. simiae Grant Run MOI 10 +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.9 compare