Fitness data for PS417_14405 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: Alkanesulfonates transport system permease protein
KEGG: sulfonate/nitrate/taurine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Valine (C) -0.8 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.3 compare
carbon source L-Glutamine (C) -0.5 -2.4 compare
phage P. simiae OR1 MOI 0.1 -0.5 -1.7 compare
liquid stress Fraxetin 2 mM; liquid stress -0.5 -2.2 compare
solid stress Fraxetin 2 mM; solid stress -0.5 -2.5 compare
solid stress Scopoletin 3 mM; solid stress -0.5 -3.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.6 compare
soil soil sample 3; outgrowth in LB -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.6 compare
carbon source L-Isoleucine (C) -0.4 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +0.9 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.5 +2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.5 +1.8 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.5 +2.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.5 +2.8 compare