Fitness data for PS417_14310 in Pseudomonas simiae WCS417

dihydrodipicolinate synthetase
SEED: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22)
KEGG: dihydrodipicolinate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.1 compare
phage P. simiae ORA MOI 0.1 -0.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
carbon source Fumarate (C) -0.5 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.1 compare
soil soil sample 5; outgrowth in LB -0.5 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
nophagecontrol Only library -0.5 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.5 -2.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare
stress Phosphomycin 0.002 mg/ml +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.2 compare
soil soil sample 7; outgrowth in LB +0.6 +2.0 compare
soil soil sample 8; outgrowth in LB +0.7 +3.3 compare