Fitness data for PS417_14305 in Pseudomonas simiae WCS417

hydroxyproline-2-epimerase
SEED: 4-hydroxyproline epimerase (EC 5.1.1.8)
KEGG: 4-hydroxyproline epimerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage JP1 MOI 10 -2.4 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -1.4 compare
phage P. simiae Grant Run MOI 0.1 -1.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.4 compare
carbon source L-Histidine (C) -1.2 -3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.9 compare
carbon source Carbon source L-Citrulline 10 mM -1.1 -2.7 compare
carbon source D-Gluconic Acid (C) -1.0 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -1.5 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.0 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.1 compare
carbon source L-Asparagine (C) -1.0 -3.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -1.9 compare
stress Choline chloride 300 mM -1.0 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.7 compare
carbon source L-Leucine (C) -0.9 -3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.9 compare
phage P. simiae ORA MOI 10 -0.9 -1.8 compare