Fitness data for PS417_13990 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.2 -2.2 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -2.2 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.7 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -2.7 compare
stress Paraquat dichloride 0.008 mg/ml -1.3 -2.0 compare
motility inner cut, LB soft agar motility assay -1.3 -2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.2 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.1 -1.2 compare
carbon source D-Gluconic Acid (C) -1.1 -1.8 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +1.1 +2.6 compare
stress Gentamicin 0.008 mg/ml +1.1 +2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +1.1 +1.1 compare
soil soil sample 2; outgrowth in LB +1.2 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.3 +2.7 compare
root root sample 6; outgrowth in LB +1.4 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +2.0 +1.6 compare