Fitness data for PS417_13850 in Pseudomonas simiae WCS417

2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data)
Original annotation: acyl-CoA dehydrogenase
SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Isoleucine (C) -5.7 -5.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -4.7 compare
phage JP1 MOI 10 -0.9 -1.6 compare
phage P. simiae OR1 MOI 0.1 -0.8 -1.4 compare
soil soil sample 3; outgrowth in LB -0.8 -2.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.8 -1.8 compare
carbon source L-Valine (C) -0.8 -1.2 compare
phage P. simiae Grant Run MOI 10 -0.7 -1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.4 compare
phage P. simiae OR Antrim MOI 1 +0.7 +3.0 compare
phage P. simiae ORA MOI 0.1 +0.7 +1.9 compare
phage P. simiae OR Antrim MOI 0.1 +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.8 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.6 compare