Fitness data for PS417_13830 in Pseudomonas simiae WCS417

hypothetical protein
SEED: Probable transmembrane protein
KEGG: CBS domain-containing membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -5.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.8 compare
stress Doxycycline hyclate 0.001 mg/ml -0.8 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.5 compare
phage P. simiae ORA MOI 1 -0.7 -2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.1 compare
phage P. simiae OR Antrim MOI 0.1 -0.6 -1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.6 +2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.8 compare
ecofab LB in EcoFAB_3.5mL +0.6 +2.6 compare
stress methylglyoxal 0.032 vol% +0.6 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.5 compare
no phage control Time6-nophage +0.7 +2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +2.4 compare
phage moi 100 Time6-phageFRS +0.7 +2.0 compare
root root sample 6; outgrowth in LB +0.8 +1.8 compare