Fitness data for PS417_13675 in Pseudomonas simiae WCS417

endoribonuclease L-PSP
SEED: RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1 -2.5 compare
phage JP1 MOI 10 -0.8 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.5 compare
motility inner cut, LB soft agar motility assay -0.6 -1.5 compare
soil soil sample 5; outgrowth in LB -0.6 -0.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -1.4 compare
motility inner cut, LB soft agar motility assay -0.5 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
phage moi 100 Time6-phageFRS -0.5 -1.9 compare
stress methylglyoxal 0.032 vol% +0.5 +1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +0.9 compare
nophagecontrol Only library +0.6 +2.3 compare
phage P. simiae OR Antrim MOI 1 +0.6 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.2 compare
solid stress 80% Methanol 2 mM; solid stress +0.8 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.6 +1.2 compare