Fitness data for PS417_13645 in Pseudomonas simiae WCS417

ABC transporter
SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
KEGG: ribose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
supernatant control Vogels_fungal_media 0.1X -1.3 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -2.2 compare
carbon source RCH2_defined_glucose with MS_media 1x -1.2 -3.2 compare
root root sample 6; outgrowth in LB -1.2 -1.2 compare
carbon source D-Fructose (C) -1.1 -3.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -1.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.1 -1.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.0 -2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -2.0 compare
phage Wcs_1 -0.9 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.5 compare
solid stress 80% Methanol 3 mM; solid stress -0.8 -1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.2 compare
stress Nalidixic 0.025 mg/ml +0.9 +1.9 compare
stress Tetracycline 0.001 mg/ml +0.9 +3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.0 +3.0 compare
soil soil sample 5; outgrowth in LB +1.0 +1.4 compare
phage P. simiae ORA MOI 10 +1.1 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +2.3 compare