Fitness data for PS417_13635 in Pseudomonas simiae WCS417

D-ribose transporter ATP-binding protein
SEED: D-xylose transport ATP-binding protein XylG
KEGG: ribose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Fructose (C) -0.9 -5.1 compare
carbon source D-Fructose (C) -0.6 -4.4 compare
ecofab LB in EcoFAB_3.5mL -0.6 -2.9 compare
soil soil sample 7; outgrowth in LB -0.6 -1.8 compare
stress Doxycycline hyclate 0.001 mg/ml -0.5 -2.3 compare
seeds Growth on radish seeds for 72 hours -0.5 -1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.2 compare
solid stress 80% Methanol 1 mM; solid stress -0.5 -2.3 compare
carbon source D-Mannose (C) -0.5 -2.1 compare
carbon source 2-Deoxy-D-Ribose (C) -0.5 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.0 compare
soil soil sample 3; outgrowth in LB +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.1 compare