Fitness data for PS417_13575 in Pseudomonas simiae WCS417

succinylglutamate desuccinylase
SEED: Succinylglutamate desuccinylase/aspartoacylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. simiae ORA MOI 0.1 -1.1 -2.3 compare
soil soil sample 8; outgrowth in LB -1.1 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.9 compare
phage JP1 MOI 1 -1.0 -1.8 compare
phage P. simiae Grant Run MOI 0.1 -0.8 -1.5 compare
phage P. simiae OR Antrim MOI 0.1 -0.8 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +1.6 compare
phage Wcs_1 +0.8 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.0 compare
no phage control Time6-nophage +1.1 +2.2 compare
phage moi 100 Time6-phageFRS +1.1 +2.3 compare
seeds Growth on radish seeds for 24 hours +1.1 +2.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.2 +3.0 compare