Fitness data for PS417_13540 in Pseudomonas simiae WCS417

sodium:proton antiporter
SEED: sodium/hydrogen exchanger family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.8 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.2 compare
phage P. simiae OR Antrim MOI 10 -0.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -1.5 compare
phage JP1 MOI 10 -0.5 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.5 compare
phage P. simiae Grant Run MOI 10 +0.5 +1.5 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +1.6 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.2 compare
phage JP1 MOI 10 +0.6 +1.5 compare
phage Wcs_0.1 +0.6 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.2 compare
stress Gentamicin 0.008 mg/ml +0.6 +2.7 compare
liquid stress Scopoletin 3 mM; liquid stress +0.7 +3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.6 compare
root root sample 6; outgrowth in LB +1.1 +1.0 compare