Fitness data for PS417_13425 in Pseudomonas simiae WCS417

cupin
SEED: Nucleoside-diphosphate-sugar epimerases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
phage JP1 MOI 1 -1.8 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.8 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.8 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.9 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.2 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.2 +1.3 compare
soil soil sample 3; outgrowth in LB +2.7 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.9 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +3.3 +1.6 compare
soil soil sample 7; outgrowth in LB +3.4 +1.3 compare
soil soil sample 4; outgrowth in LB +3.8 +1.3 compare
soil soil sample 5; outgrowth in LB +4.0 +1.1 compare
soil soil sample 6; outgrowth in LB +4.2 +1.6 compare
soil soil sample 8; outgrowth in LB +4.4 +1.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +4.7 +1.4 compare
soil soil sample 2; outgrowth in LB +4.8 +1.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +5.3 +1.4 compare
root root sample 6; outgrowth in LB +5.3 +1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +7.9 +2.2 compare