Fitness data for PS417_01340 in Pseudomonas simiae WCS417

agmatine deiminase
SEED: Agmatine deiminase (EC 3.5.3.12)
KEGG: agmatine deiminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
soil soil sample 7; outgrowth in LB -2.3 -3.7 compare
soil soil sample 2; outgrowth in LB -2.0 -3.9 compare
soil soil sample 3; outgrowth in LB -1.8 -4.2 compare
soil soil sample 4; outgrowth in LB -1.6 -4.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.3 -3.7 compare
seeds Growth on radish seeds for 72 hours -1.2 -4.5 compare
soil soil sample 5; outgrowth in LB -1.2 -3.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.1 -4.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -2.3 compare
phage P. simiae OR Antrim MOI 10 -1.1 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.1 compare
motility inner cut, LB soft agar motility assay -1.0 -3.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.9 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +2.5 compare
stress Gentamicin 0.008 mg/ml +1.2 +5.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.4 +7.6 compare