Fitness data for PS417_13350 in Pseudomonas simiae WCS417

phytanoyl-CoA dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 -2.1 compare
phage P. simiae Grant Run MOI 10 -0.7 -2.5 compare
phage JP1 MOI 0.1 -0.7 -2.0 compare
phage P. simiae ORA MOI 10 -0.6 -2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -1.6 compare
phage P. simiae Grant Run MOI 0.1 -0.6 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.6 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
solid stress Scopoletin 2 mM; solid stress +0.5 +2.1 compare
phage FRSphage +0.5 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.5 compare