Fitness data for PS417_13295 in Pseudomonas simiae WCS417

TetR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.6 -4.5 compare
carbon source 2-Deoxy-D-Ribose (C) -1.5 -5.7 compare
soil soil sample 5; outgrowth in LB -1.5 -4.5 compare
soil soil sample 8; outgrowth in LB -1.5 -4.6 compare
soil soil sample 3; outgrowth in LB -1.5 -3.6 compare
soil soil sample 7; outgrowth in LB -1.3 -2.8 compare
soil soil sample 4; outgrowth in LB -1.2 -3.2 compare
soil soil sample 6; outgrowth in LB -1.2 -3.2 compare
carbon source 2-Deoxy-D-Ribose (C) -1.2 -5.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.1 -2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -4.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9 -2.5 compare
soil soil sample 2; outgrowth in LB -0.9 -2.9 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.9 -3.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -3.7 compare
carbon source D-Sorbitol (C) -0.9 -3.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.9 -4.6 compare
carbon source D-Glucose-6-Phosphate (C) -0.8 -3.3 compare
carbon source Gly-Glu (C) -0.8 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.0 +3.3 compare