Fitness data for PS417_12780 in Pseudomonas simiae WCS417

(Fe-S)-binding protein
SEED: 4Fe-4S ferredoxin, iron-sulfur binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility inner cut, LB soft agar motility assay -1.4 -3.1 compare
seeds Growth on radish seeds for 72 hours -1.2 -2.6 compare
seeds Growth on radish seeds for 72 hours -1.0 -1.7 compare
phage P. simiae ORA MOI 10 -0.8 -2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8 -1.5 compare
phage P. simiae OR Antrim MOI 10 -0.8 -2.1 compare
motility outer cut, LB soft agar motility assay -0.7 -2.6 compare
stress methylglyoxal 0.032 vol% -0.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +2.8 compare
soil soil sample 3; outgrowth in LB +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.8 +2.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.8 +3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +3.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.4 +1.5 compare