Fitness data for PS417_12565 in Pseudomonas simiae WCS417

2-dehydro-3-deoxygluconokinase
SEED: 2-ketogluconate kinase (EC 2.7.1.13)
KEGG: dehydrogluconokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.0 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.0 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.7 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.7 -2.3 compare
no phage control Time6-nophage -2.3 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.2 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -1.0 compare
stress Choline chloride 300 mM -1.9 -2.4 compare
phage P. simiae ORA MOI 1 -1.7 -2.2 compare
motility inner cut, LB soft agar motility assay -1.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -0.8 compare
liquid stress 80% Methanol 3 mM; liquid stress -1.5 -2.4 compare
nitrogen source Urea (N) -1.5 -2.8 compare
ecofab LB in EcoFAB_3.5mL +1.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +3.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.8 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +2.0 +1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +2.3 +3.4 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +2.6 +2.5 compare
root root sample 6; outgrowth in LB +2.7 +2.6 compare