Fitness data for PS417_12555 in Pseudomonas simiae WCS417

phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data)
Original annotation: bifunctional glyoxylate/hydroxypyruvate reductase B
SEED: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)
KEGG: phosphogluconate 2-dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source Adenine (N) -4.5 -13.9 compare
carbon source D-Gluconic Acid (C) -3.4 -12.7 compare
nitrogen source nitrate (N) -3.1 -10.2 compare
carbon source D-Gluconic Acid (C) -2.7 -9.0 compare
nitrogen source Inosine (N) -2.6 -12.0 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -2.2 -8.3 compare
nitrogen source Ammonium chloride (N) -2.1 -7.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -10.8 compare
nitrogen source Urea (N) -2.0 -6.3 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -1.9 -9.8 compare
nitrogen source Putrescine (N) -1.8 -5.3 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.3 -4.6 compare
carbon source D-Glucose (C) -1.2 -4.9 compare
nitrogen source Cytosine (N) -1.2 -4.9 compare
nitrogen source Cytidine (N) -1.1 -4.8 compare
carbon source D-Glucose (C) -1.1 -6.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -3.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.4 compare
carbon source D-Glucose (C) -0.9 -4.6 compare