Fitness data for PS417_12530 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator in custer with plant-induced nitrilase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -0.9 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.3 compare
phage P. simiae ORA MOI 1 -0.8 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.7 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.9 compare
soil soil sample 7; outgrowth in LB +0.8 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.0 compare
soil soil sample 8; outgrowth in LB +1.0 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.3 compare
soil soil sample 4; outgrowth in LB +1.0 +1.3 compare
soil soil sample 3; outgrowth in LB +1.0 +2.1 compare
soil soil sample 2; outgrowth in LB +1.1 +1.3 compare
soil soil sample 5; outgrowth in LB +1.1 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.4 +2.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +1.4 +1.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.5 +1.4 compare
root root sample 6; outgrowth in LB +1.7 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.8 +1.8 compare