Fitness data for PS417_12245 in Pseudomonas simiae WCS417

GNAT family acetyltransferase
SEED: Streptothricin acetyltransferase, Streptomyces lavendulae type

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.8 -2.3 compare
phage P. simiae ORA MOI 1 -1.2 -2.3 compare
motility inner cut, LB soft agar motility assay -1.1 -2.3 compare
phage Wcs_1 -1.1 -2.0 compare
phage P. simiae OR Antrim MOI 0.1 -1.0 -2.6 compare
solid stress Fraxetin 1 mM; solid stress -0.9 -1.6 compare
phage JP1 MOI 10 -0.9 -1.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.8 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 -1.6 compare
seeds Growth on radish seeds for 24 hours -0.8 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.8 -2.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.8 +2.5 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +0.8 +1.7 compare
stress LB_noSalt with Chloride 500 mM +0.8 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +3.9 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.9 +2.3 compare
phage JP1 MOI 10 +0.9 +2.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.2 +2.7 compare