Fitness data for PS417_12190 in Pseudomonas simiae WCS417

microcin ABC transporter ATP-binding protein
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: microcin C transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.5 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.3 compare
phage JP1 MOI 10 -1.1 -2.4 compare
phage Wcs_1 -1.1 -2.4 compare
phage JP1 MOI 1 -1.0 -1.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.0 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.8 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.0 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.4 compare
phage P. simiae OR1 MOI 0.1 -0.9 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +2.9 compare
liquid stress Fraxetin 2 mM; liquid stress +1.0 +2.5 compare
stress Nalidixic 0.025 mg/ml +1.0 +2.5 compare
stress Chloramphenicol 0.0075 mg/ml +1.1 +2.6 compare
seeds Growth on radish seeds for 72 hours +1.2 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.8 +8.8 compare