Fitness data for PS417_12175 in Pseudomonas simiae WCS417

peptide ABC transporter permease
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: microcin C transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.2 -3.1 compare
stress Gentamicin 0.008 mg/ml -1.6 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -2.0 compare
soil soil sample 2; outgrowth in LB -1.3 -1.9 compare
phage P. simiae OR Antrim MOI 1 -1.3 -2.3 compare
seeds Growth on radish seeds for 72 hours -1.3 -1.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.2 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.8 compare
phage P. simiae OR1 MOI 0.1 -1.0 -1.5 compare
phage JP1 MOI 10 -1.0 -2.1 compare
phage Wcs_1 -0.9 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -2.4 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.9 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +2.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +2.5 compare
liquid stress Fraxetin 2 mM; liquid stress +0.9 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.2 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +1.4 compare