Fitness data for PS417_12100 in Pseudomonas simiae WCS417

amino acid ABC transporter permease
SEED: amino acid ABC transporter, permease protein
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Glucosamine Hydrochloride (C) -1.8 -7.1 compare
carbon source D-Glucosamine Hydrochloride (C) -1.6 -7.8 compare
phage P. simiae ORA MOI 0.1 -0.9 -4.3 compare
phage JP1 MOI 10 -0.7 -2.2 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.5 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.5 -2.8 compare
phage P. simiae ORA MOI 0.1 -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.1 compare
seeds Growth on radish seeds for 24 hours +0.5 +2.2 compare
solid stress Fraxetin 1 mM; solid stress +0.5 +2.1 compare
carbon source L-Valine (C) +0.5 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.9 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.3 +1.9 compare