Fitness data for PS417_12075 in Pseudomonas simiae WCS417

DNA-binding protein
SEED: Putative transcriptional regulator of sorbose uptake and utilization genes

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -4.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -3.2 compare
carbon source Inosine (C) -1.2 -6.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -3.5 compare
carbon source Gly-Glu (C) -1.1 -4.3 compare
carbon source Gly-Glu (C) -1.1 -4.7 compare
carbon source D-Ribose (C) -1.0 -6.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.1 compare
carbon source Inosine (C) -1.0 -5.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -3.1 compare
carbon source Uridine (C) -0.9 -4.4 compare
carbon source D-Mannose (C) +0.9 +6.0 compare
carbon source D-Mannose (C) +1.0 +6.0 compare
root root sample 6; outgrowth in LB +1.0 +4.0 compare
soil soil sample 3; outgrowth in LB +1.0 +3.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.1 +6.4 compare
carbon source Xylitol (C) +1.6 +9.7 compare
carbon source Xylitol (C) +2.3 +10.4 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +2.6 +16.6 compare