Fitness data for PS417_11960 in Pseudomonas simiae WCS417

Valyl-tRNA synthetase
SEED: Valyl-tRNA synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Valine (C) -0.6 -1.9 compare
phage P. simiae OR Antrim MOI 10 -0.6 -2.5 compare
motility inner cut, LB soft agar motility assay -0.5 -3.0 compare
liquid stress Fraxetin 2 mM; liquid stress +0.4 +2.2 compare
phage P. simiae OR1 MOI 0.1 +0.4 +1.5 compare
solid stress Fraxetin 3 mM; solid stress +0.4 +1.5 compare
phage JP1 MOI 10 +0.4 +1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +2.3 compare
carbon source Carbon source D-Mannitol 10 mM +0.5 +2.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
carbon source Carbon source L-Ornithine 5 mM +0.5 +3.2 compare
carbon source Carbon source L-Citrulline 10 mM +0.5 +2.0 compare
carbon source Carbon source D-Mannitol 5 mM +0.5 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3 +1.7 compare