Fitness data for PS417_11925 in Pseudomonas simiae WCS417

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.3 -1.7 compare
stress Gentamicin 0.008 mg/ml -2.3 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.1 -2.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.9 -1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.8 -2.0 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.7 compare
phage P. simiae OR1 MOI 0.1 -1.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.2 -1.9 compare
solid stress Fraxetin 3 mM; solid stress -1.2 -1.4 compare
solid stress Fraxetin 0.5 mM; solid stress -1.2 -1.6 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.2 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.2 +1.5 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.3 +2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.3 +2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.3 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +1.5 compare
motility inner cut, LB soft agar motility assay +1.4 +3.1 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +1.7 +2.2 compare