Fitness data for PS417_11875 in Pseudomonas simiae WCS417

Inositol 2-dehydrogenase (EC 1.1.1.18) (from data)
Original annotation: inositol 2-dehydrogenase
SEED: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
KEGG: myo-inositol 2-dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.4 -5.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.3 -6.5 compare
carbon source m-Inositol (C) -3.4 -7.2 compare
carbon source m-Inositol (C) -3.0 -8.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.8 -3.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.7 -6.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.3 -3.7 compare
stress Gentamicin 0.008 mg/ml -1.1 -2.7 compare
stress methylglyoxal 0.032 vol% -0.8 -1.7 compare
phage P. simiae OR Antrim MOI 10 +0.8 +3.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.8 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +3.2 compare
stress Choline chloride 300 mM +0.8 +3.6 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +0.8 +3.1 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x +0.9 +2.3 compare
carbon source D-Glucose-6-Phosphate (C) +0.9 +3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +2.0 compare
phage P. simiae OR Antrim MOI 0.1 +1.0 +2.0 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +1.4 +4.3 compare