Fitness data for PS417_11800 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator YnfL

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
root root sample 6; outgrowth in LB -0.6 -1.7 compare
carbon source D-Galacturonic Acid (C) -0.6 -2.9 compare
no phage control Time6-nophage -0.6 -2.6 compare
stress Cisplatin 0.01 mg/ml -0.6 -2.6 compare
carbon source acetate (C) -0.6 -2.2 compare
stress R2A with Fusaric 120 ug/mL -0.6 -2.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -1.7 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.5 -2.3 compare
carbon source Fumarate (C) -0.5 -2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.0 compare
soil soil sample 5; outgrowth in LB +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.4 compare
phage P. simiae OR1 MOI 0.1 +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +1.3 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.7 compare