Fitness data for PS417_11795 in Pseudomonas simiae WCS417

FAD-dependent oxidoreductase
SEED: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -3.1 compare
stress methylglyoxal 0.032 vol% -0.8 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.0 compare
motility inner cut, LB soft agar motility assay -0.8 -2.3 compare
phage P. simiae Grant Run MOI 0.1 -0.7 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.9 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.7 -2.8 compare
carbon source acetate (C) -0.7 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.7 +1.2 compare
root root sample 6; outgrowth in LB +0.7 +2.0 compare
carbon source L-Valine (C) +0.7 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +1.5 compare
phage P. simiae OR Antrim MOI 1 +0.8 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2 +1.3 compare