Fitness data for PS417_11730 in Pseudomonas simiae WCS417

PvdJ/PvdD/PvdP-like protein
SEED: Pyoverdine biosynthesis related protein PvdP

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage JP1 MOI 0.1 -0.9 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.0 compare
phage P. simiae OR Antrim MOI 0.1 -0.7 -2.6 compare
phage P. simiae OR Antrim MOI 1 -0.7 -1.2 compare
stress Gentamicin 0.008 mg/ml -0.6 -2.3 compare
seeds Growth on radish seeds for 72 hours -0.6 -1.3 compare
solid stress Fraxetin 3 mM; solid stress -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.1 compare
phage JP1 MOI 1 -0.6 -1.6 compare
phage P. simiae Grant Run MOI 10 -0.6 -1.5 compare
carbon source D-Alanine (C) +0.6 +1.5 compare
phage P. simiae OR1 MOI 0.1 +0.6 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +2.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +1.1 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.1 +6.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.4 +7.5 compare