Fitness data for PS417_11720 in Pseudomonas simiae WCS417

class V aminotransferase
SEED: Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.2 -2.4 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.1 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.0 -1.9 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.9 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -1.1 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM +0.8 +2.4 compare
nophagecontrol TIme6-nophage +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +2.5 compare
carbon source L-Citrulline (C) +0.8 +3.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.6 compare
soil soil sample 7; outgrowth in LB +1.0 +2.4 compare
phage P. simiae ORA MOI 10 +1.1 +1.4 compare
phage P. simiae OR1 MOI 0.1 +1.2 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.5 +3.2 compare