Fitness data for PS417_11545 in Pseudomonas simiae WCS417

spermidine/putrescine ABC transporter substrate-binding protein
SEED: Spermidine/putrescine-binding periplasmic protein
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.7 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.5 compare
phage JP1 MOI 10 -1.0 -2.3 compare
supernatant control Vogels_fungal_media 0.1X -0.9 -2.0 compare
liquid stress Scopoletin 3 mM; liquid stress -0.8 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.2 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -2.0 compare
soil soil sample 7; outgrowth in LB -0.7 -1.5 compare
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -0.7 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.2 compare
motility inner cut, LB soft agar motility assay +0.7 +1.6 compare
carbon source D-Glucose (C) +0.8 +2.6 compare
carbon source L-Valine (C) +0.8 +1.9 compare
carbon source L-Valine (C) +0.8 +0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.9 compare
root root sample 6; outgrowth in LB +0.8 +1.6 compare
motility outer cut, LB soft agar motility assay +0.9 +1.9 compare
seeds Growth on radish seeds for 72 hours +1.4 +2.1 compare