Fitness data for PS417_11520 in Pseudomonas simiae WCS417

Sorbitol dehydrogenase (EC 1.1.1.14) (from data)
Original annotation: sorbitol dehydrogenase
SEED: Sorbitol dehydrogenase (EC 1.1.1.14)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D-Sorbitol (C) -6.0 -7.1 compare
carbon source D-Sorbitol (C) -5.3 -5.6 compare
root root sample 6; outgrowth in LB -1.5 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.6 compare
carbon source Xylitol (C) -1.2 -3.2 compare
soil soil sample 2; outgrowth in LB -1.1 -1.6 compare
soil soil sample 6; outgrowth in LB -1.1 -2.9 compare
carbon source Xylitol (C) -1.1 -4.3 compare
stress methylglyoxal 0.032 vol% -1.1 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.9 compare
soil soil sample 7; outgrowth in LB -1.0 -2.3 compare
stress Chloramphenicol 0.015 mg/ml -0.8 -3.3 compare
carbon source D-Mannose (C) -0.8 -2.9 compare
nitrogen source Inosine (N) -0.8 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.2 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.1 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.2 +1.3 compare