Fitness data for PS417_11505 in Pseudomonas simiae WCS417

ion channel protein Tsx
SEED: Nucleoside-specific channel-forming protein Tsx precursor
KEGG: nucleoside-specific channel-forming protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage JP1 MOI 1 -0.7 -2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.4 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.5 -2.3 compare
phage P. simiae Grant Run MOI 10 -0.4 -1.9 compare
liquid stress Fraxetin 1 mM; liquid stress -0.4 -2.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.8 compare
soil soil sample 5; outgrowth in LB +0.6 +2.3 compare
nitrogen source Adenosine (N) +3.8 +26.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) +4.5 +3.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) +4.6 +2.9 compare