Fitness data for PS417_11390 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.3 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.2 compare
soil soil sample 2; outgrowth in LB -1.2 -2.0 compare
soil soil sample 7; outgrowth in LB -1.1 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.0 -1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.5 compare
phage P. simiae OR Antrim MOI 0.1 -0.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.1 compare
phage P. simiae Grant Run MOI 10 -0.8 -1.6 compare
solid stress Scopoletin 1 mM; solid stress -0.8 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7 -2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -1.5 compare
solid stress Scopoletin 0.5 mM; solid stress -0.7 -2.5 compare
solid stress Fraxetin 3 mM; solid stress -0.7 -1.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.5 compare