Fitness data for PS417_11350 in Pseudomonas simiae WCS417

biopolymer transporter ExbB
SEED: MotA/TolQ/ExbB proton channel family protein
KEGG: biopolymer transport protein ExbB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -2.8 compare
phage JP1 MOI 10 -1.1 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -2.0 compare
root root sample 6; outgrowth in LB -0.9 -2.5 compare
soil soil sample 5; outgrowth in LB -0.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
phage P. simiae ORA MOI 1 -0.7 -2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.1 compare
solid stress Fraxetin 1 mM; solid stress +0.7 +2.1 compare
phage P. simiae OR Antrim MOI 1 +0.7 +2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +1.8 compare
phage Wcs_0.1 +0.9 +2.4 compare
seeds Growth on radish seeds for 72 hours +1.0 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.3 compare
phage JP1 MOI 10 +1.6 +2.7 compare