Fitness data for PS417_11305 in Pseudomonas simiae WCS417

general secretion pathway protein GspF
SEED: General secretion pathway protein F
KEGG: general secretion pathway protein F

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
seeds Growth on radish seeds for 72 hours -1.3 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.3 compare
carbon source L-Valine (C) -1.0 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.4 compare
soil soil sample 8; outgrowth in LB -0.9 -1.8 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.9 -2.5 compare
phage P. simiae OR Antrim MOI 0.1 -0.8 -1.5 compare
phage P. simiae OR Antrim MOI 0.1 -0.8 -2.0 compare
phage P. simiae Grant Run MOI 10 -0.8 -1.4 compare
nophagecontrol Only library -0.8 -1.7 compare
phage P. simiae OR Antrim MOI 10 -0.7 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -0.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.5 compare
stress methylglyoxal 0.032 vol% +0.8 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.7 compare
soil soil sample 7; outgrowth in LB +0.8 +1.6 compare
phage JP1 MOI 10 +1.0 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.8 compare