Fitness data for PS417_11300 in Pseudomonas simiae WCS417

general secretion pathway protein GspE
KEGG: general secretion pathway protein E

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.9 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM -1.1 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.0 -2.2 compare
phage P. simiae OR Antrim MOI 0.1 -1.0 -2.0 compare
phage JP1 MOI 1 -1.0 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.8 compare
motility outer cut, LB soft agar motility assay -0.9 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.5 compare
carbon source Carbon source L-Citrulline 10 mM -0.8 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.8 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +3.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +1.2 compare
carbon source Trisodium citrate (C) +0.8 +1.9 compare
ecofab LB in EcoFAB_3.5mL +0.9 +2.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.9 +1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.9 +1.8 compare