Fitness data for PS417_11230 in Pseudomonas simiae WCS417

hydroxyacid dehydrogenase
SEED: Alcohol dehydrogenase (EC 1.1.1.1)
KEGG: uncharacterized zinc-type alcohol dehydrogenase-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.2 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -2.1 compare
phage JP1 MOI 0.1 -0.8 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.0 compare
phage P. simiae ORA MOI 0.1 -0.7 -1.6 compare
phage JP1 MOI 10 -0.7 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -1.6 compare
carbon source Carbon source L-Ornithine 5 mM +0.7 +3.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.3 compare
motility inner cut, LB soft agar motility assay +0.7 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
carbon source L-Alanine (C) +0.7 +3.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.7 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +1.6 compare
carbon source L-Valine (C) +0.9 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.0 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.8 compare