Fitness data for PS417_11180 in Pseudomonas simiae WCS417

TetR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
soil soil sample 8; outgrowth in LB -1.9 -2.4 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -1.6 -4.2 compare
stress methylglyoxal 0.032 vol% -1.2 -1.4 compare
carbon source L-Histidine (C) -1.2 -3.0 compare
carbon source Glycerol (C) -1.1 -3.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -1.8 compare
nitrogen source Inosine (N) -1.0 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.3 compare
seeds Growth on radish seeds for 72 hours -1.0 -1.4 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -1.0 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -2.5 compare
seeds Growth on radish seeds for 24 hours -0.9 -1.4 compare
carbon source D-Glucosamine Hydrochloride (C) -0.9 -2.2 compare
soil soil sample 3; outgrowth in LB -0.9 -1.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.9 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.4 compare
phage P. simiae OR Antrim MOI 10 +1.1 +2.5 compare
phage P. simiae OR Antrim MOI 0.1 +1.2 +1.7 compare