Fitness data for PS417_11110 in Pseudomonas simiae WCS417

xylose isomerase
SEED: FIG00955080: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9 -2.4 compare
phage JP1 MOI 10 -0.8 -2.2 compare
phage P. simiae ORA MOI 0.1 -0.7 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -2.2 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -0.6 -2.4 compare
carbon source L-Leucine (C) -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +1.3 compare
phage P. simiae OR Antrim MOI 10 +0.5 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.6 +1.7 compare
solid stress 80% Methanol 2 mM; solid stress +0.6 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.4 compare
phage P. simiae Grant Run MOI 0.1 +0.6 +1.0 compare
seeds Growth on radish seeds for 24 hours +0.7 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +3.9 compare
seeds Growth on radish seeds for 72 hours +1.1 +3.7 compare