Fitness data for PS417_11085 in Pseudomonas simiae WCS417

ATPase AAA
SEED: Sigma-54 dependent transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae ORA MOI 0.1 -0.7 -2.3 compare
phage P. simiae Grant Run MOI 0.1 -0.6 -2.8 compare
solid stress Fraxetin 3 mM; solid stress -0.6 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.2 compare
phage P. simiae OR Antrim MOI 1 -0.6 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.0 compare
seeds Growth on radish seeds for 72 hours -0.4 -1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.1 compare
phage P. simiae OR Antrim MOI 10 -0.4 -1.6 compare
motility outer cut, LB soft agar motility assay -0.4 -1.9 compare
liquid stress 80% Methanol 2 mM; liquid stress -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +1.7 compare
no stress control on plate growth on LB_noSalt plate +0.4 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.4 compare
root root sample 6; outgrowth in LB +0.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
soil soil sample 6; outgrowth in LB +0.7 +2.9 compare